Academic
Computational Biology
Featured
NucleoSim
Software Developer
4 years 1 month
Python 2.7 feature-engineering and plotting tool for biomolecular simulations. Grew in scope during master's research, eventually leading to a focused rewrite (YetI).
Key Responsibilities
- Planned and implemented the tool's logic using agile development paradigms to iteratively address needs for feature engineering and data representation.
- Applied advanced knowledge of physics and chemistry to design new features based on pre-existing ones, enhancing the depth of analysis.
- Documented tool functionality and usage for academic dissemination and reproducibility.
Technology Stack
Python
numpy
mdtraj
unittest
matplotlib
CI/CD Pipelines
TravisCI
Tags
#academic
#data-engineering
#data-visualization